Index (PEGASUS)

A C D E F G H I J K L M N O P R S T U V W X Y
All Classes All Packages

A

aarch64 - edu.isi.pegasus.planner.dax.Executable.ARCH
Abstract - Class in edu.isi.pegasus.planner.selector.site: The Abstract Site selector.
Abstract() - Constructor for class edu.isi.pegasus.planner.selector.site.Abstract
AbstractJob - Class in edu.isi.pegasus.planner.dax
AbstractJob() - Constructor for class edu.isi.pegasus.planner.dax.AbstractJob
AbstractJob(AbstractJob) - Constructor for class edu.isi.pegasus.planner.dax.AbstractJob: Copy constructor
AbstractJob.JsonSerializer - Class in edu.isi.pegasus.planner.dax: Custom serializer for YAML representation of AbstractJob
AbstractPerJob - Class in edu.isi.pegasus.planner.selector.site: The base class for the site selectors that want to map one job at a time.
AbstractPerJob() - Constructor for class edu.isi.pegasus.planner.selector.site.AbstractPerJob
ACTUAL_FINISH_TIME - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The constant to be passed to the accessor functions to get or set the actual end time for a job.
ACTUAL_START_TIME - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The constant to be passed to the accessor functions to get or set the actual start time for a job.
ADAG - Class in edu.isi.pegasus.planner.dax: This class provides the Java API to create Abstract Workflow files. Starting 5.0 Release, this class by default writes out YAML formatted abstract workflow file.
ADAG(String) - Constructor for class edu.isi.pegasus.planner.dax.ADAG: The Simple constructor for the DAX object
ADAG(String, int, int) - Constructor for class edu.isi.pegasus.planner.dax.ADAG: DAX Constructor
ADAG.FORMAT - Enum in edu.isi.pegasus.planner.dax: Enum to indicate how the generated dax file should be formatted
ADAG.JsonSerializer - Class in edu.isi.pegasus.planner.dax: Custom serializer for YAML representation of ADAG
add(Object, Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: Adds an object to the underlying bag corresponding to a particular key.
addAbstractJob(AbstractJob) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add AbstractJob to the DAX
addAbstractJobs(List<AbstractJob>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add AbstractJobs to the DAX
addArgument(File) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a file object to the argument List.
addArgument(File[]) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a Array of File objects to the argument list.
addArgument(File[], String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Deprecated.
As of 5.0.2 release this function will not work consistently as ARG_LIMITER is always added between args
addArgument(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a string argument to the argument List.
addArgument(String, File) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and File value to the argument List.
The argkey and argvalue are seperated by space.
Example addArgument("-i",new File("f.a")) will result in the argument being added as -i <file name="f.a">
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(String, File[]) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and an array of Files to the argument List.
The argkey and argvalue are separated space.
The files are separated by a space
Example:
File[] files = {new File("f.a1"), new File("f.a2")};
job.addArgument("-i",files)
will result in the argument being added as -i <file name="f.a1"> <file name="f.a2">
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(String, File[], String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and an array of Files to the argument List.
The argkey and argvalue are separated by the argdelimiter.
The files are separated by a filedelimiter
Example:
File[] files = {new File("f.a1"), new File("f.a2")};
job.addArgument("-i",files,"=",",")
will result in the argument being added as -i=<file name="f.a1">,<file name="f.a2">
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(String, File, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and File value to the argument List.
The argkey and argvalue are separated by the argdelimiter.
Example addArgument("-i",new File("f.a"),"=") will result in the argument being added as -i=<file name="f.a">
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and value to the argument List.
addArgument(String, String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and value to the argument List.
The argkey and argvalue are seperated by argdelimiter.
Example addArgument("-p","0","=") will result in the argument being added as -p=0
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(String, List<File>) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and a List of Files to the argument List.
The argkey and argvalue are separated space.
The files are separated by a space
Example:
addArgument(String, List<File>, String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a argument key and a List of Files to the argument List.
The argkey and argvalue are separated by the argdelimiter.
The files are separated by a filedelimter
Example:
List<File> files = new LinkedList<File>(); files.add(new File("f.a1")); files.add(new File("f.a2")); job.addArgument("-i",files,"=",",") will result in the argument being added as -i=<file name="f.a1">,<file name="f.a2">
Multiple calls to addArgument results in the arguments being separated by space.
addArgument(List<File>) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a List of File objects to the argument list.
addArgument(List<File>, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Deprecated.
As of 5.0.2 release this function will not work consistently as ARG_LIMITER is always added between args
addDAG(DAG) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a DAG job to the DAX
addDAGs(List<DAG>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add multiple DAG jobs to the DAX
addDAX(DAX) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a DAX job to the DAX
addDAXs(List<DAX>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add multiple DAX jobs to the DAX
addDependency(AbstractJob, AbstractJob) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a parent child dependency between two jobs,dax,dag
addDependency(AbstractJob, AbstractJob, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a parent child dependency with a dependency label
addDependency(String, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a parent child dependency between two jobs,dax,dag
addDependency(String, String, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a parent child dependency with a dependency label
addExecutable(Executable) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Executable to the DAX
addExecutables(List<Executable>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Multiple Executable objects to the DAX
addFile(File) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a RC File object to the top of the DAX.
addFiles(List<File>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Files to the RC Section on top of the DAX
addInvoke(Invoke) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add notification to the job
addInvoke(Invoke) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a Notification for this Workflow
addInvoke(Invoke) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a Notification for this Executable Same as add Notification
addInvoke(Invoke) - Method in class edu.isi.pegasus.planner.dax.Transformation: Add a Notification for this Transformation
addInvoke(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add Notification to the job
addInvoke(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a Notification for this Workflow
addInvoke(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a Notification for this Executable same as addNotification
addInvoke(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.Transformation: Add a Notification for this Transformation
addInvokes(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add Notifications to the job
addInvokes(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a List of Notifications for this Workflow
addInvokes(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a List of Notifications for this Executable Same as addNotifications
addInvokes(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.Transformation: Add a List of Notifications for this Transformation
addJob(Job) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Job to the DAX
addJobs(List<Job>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add multiple Jobs to the DAX
addMetaData(MetaData) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a MetaData object for the Catalog object
addMetaData(String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Adds metadata to the workflow
addMetaData(String, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Adds metadata to the workflow
addMetaData(String, String) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a Metadata entry for the Catalog
addMetaData(List<MetaData>) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a List of MetaData objects to the Catalog entry object
addNotification(Invoke) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add notification to the job
addNotification(Invoke) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a Notification for this Workflow
addNotification(Invoke) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a Notification for this Executable Same as addInvoke
addNotification(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add Notification to the job
addNotification(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a Notification for this Workflow
addNotification(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a Notification for this Executable same as addInvoke
addNotification(Invoke.WHEN, String) - Method in class edu.isi.pegasus.planner.dax.Transformation: Add a Notification for this Transformation same as addInvoke()
addNotifications(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add Notifications to the job
addNotifications(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add a List of Notifications for this Workflow
addNotifications(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.Executable: Add a List of Notifications for this Executable.
addNotifications(List<Invoke>) - Method in class edu.isi.pegasus.planner.dax.Transformation: Add a List of Notifications for this Transformation.
addPhysicalFile(PFN) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a PFN object to the Catalog
addPhysicalFile(String) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a pfn url to the Catalog
addPhysicalFile(String, String) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a PFN url and a site id to the Catalog
addPhysicalFiles(List<PFN>) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a list of PFN objects to the Catalog
addProfile(Profile) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a Profile object
addProfile(Profile.NAMESPACE, String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a profile to the job
addProfile(Profile.NAMESPACE, String, String) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a profile to the catalog entry
addProfile(Profile.NAMESPACE, String, String) - Method in class edu.isi.pegasus.planner.dax.PFN
addProfile(String, String, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a profile to the job
addProfile(String, String, String) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a profile to the catalog entry
addProfile(String, String, String) - Method in class edu.isi.pegasus.planner.dax.PFN
addProfiles(Profile) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a Profile object to this Catalog entry
addProfiles(Profile) - Method in class edu.isi.pegasus.planner.dax.PFN
addProfiles(List<Profile>) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Add a list of Profile objects
addProfiles(List<Profile>) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Add a List of profile objects to this Catalog entry
addProfiles(List<Profile>) - Method in class edu.isi.pegasus.planner.dax.PFN
addRequirement(Executable) - Method in class edu.isi.pegasus.planner.dax.Executable: Add another executable as a requirement to this executable
addTransformation(Transformation) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Transformation to the DAX
addTransformations(List<Transformation>) - Method in class edu.isi.pegasus.planner.dax.ADAG: Add Multiple Transformation to the DAX
aix - edu.isi.pegasus.planner.dax.Executable.OS
AIX - edu.isi.pegasus.planner.dax.Executable.OS
Algorithm - Class in edu.isi.pegasus.planner.selector.site.heft: The HEFT based site selector.
Algorithm(PegasusBag) - Constructor for class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The default constructor.
all - edu.isi.pegasus.planner.dax.Invoke.WHEN
ARCH() - Constructor for enum edu.isi.pegasus.planner.dax.Executable.ARCH
ARG_DELIMITER - Static variable in class edu.isi.pegasus.planner.dax.AbstractJob
at_end - edu.isi.pegasus.planner.dax.Invoke.WHEN
AVERAGE_BANDWIDTH - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The average bandwidth between the sites.
AVERAGE_DATA_SIZE_BETWEEN_JOBS - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The average data that is transferred in between 2 jobs in the workflow.
AVG_COMPUTE_TIME - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The constant to be passed to the accessor functions to get or set the average compute time for the node.

C

calculateAverageComputeTime(Job) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Returns the average compute time in seconds for a job.
calculateEstimatedStartAndFinishTime(GraphNode, String) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Estimates the start and finish time of a job on a site.
CatalogType - Class in edu.isi.pegasus.planner.dax: Abstract Type for RC and TC Sections of the DAX.
CatalogType() - Constructor for class edu.isi.pegasus.planner.dax.CatalogType
CatalogType(CatalogType) - Constructor for class edu.isi.pegasus.planner.dax.CatalogType: Copy Constructor
checkID(String) - Static method in class edu.isi.pegasus.planner.dax.AbstractJob: Copy Constructor
checkpoint - edu.isi.pegasus.planner.dax.File.LINK
CHECKPOINT - edu.isi.pegasus.planner.dax.File.LINK
clone() - Method in class edu.isi.pegasus.planner.dax.Edge
clone() - Method in class edu.isi.pegasus.planner.dax.File: Return a clone of this File
clone() - Method in class edu.isi.pegasus.planner.dax.Invoke: Create a copy of this Invoke object
clone() - Method in class edu.isi.pegasus.planner.dax.MetaData: Create a copy of this Metdata Object
clone() - Method in class edu.isi.pegasus.planner.dax.Profile: Create a copy of this Profile
clone() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Returns a copy of this object.
compare(Object, Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.HeftGraphNodeComparator: Implementation of the Comparable interface.
compareTo(Object) - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Compares the Rank object with another rank object.
computeDownwardRank(GraphNode) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Computes the downward rank of a node.
computePriority(int) - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Computes priority based on the max rank passed
condor - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
CONDOR - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
containsAbstractJob(AbstractJob) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if an abstractjob exists in the DAX
containsAbstractJobId(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a jobid exists in the DAX
containsDAG(DAG) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a DAG job exists in the DAX
containsDAGId(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a DAG job id exists in the DAX
containsDAX(DAX) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a DAX job exists in the DAX
containsDAXId(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a DAX job id exists in the DAX
containsExecutable(Executable) - Method in class edu.isi.pegasus.planner.dax.ADAG: Checks if a given executable exists in the DAX based Transformation Catalog
containsJob(Job) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a job exists in the DAX
containsJobId(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Check if a jobid exists in the DAX
containsKey(Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: Returns true if the namespace contains a mapping for the specified key.
containsTransformation(Transformation) - Method in class edu.isi.pegasus.planner.dax.ADAG: Checks if a given Transformation exists in the DAX based Transformation Catalog

D

DAG - Class in edu.isi.pegasus.planner.dax: DAG Class to hold the DAG job object.
DAG(DAG) - Constructor for class edu.isi.pegasus.planner.dax.DAG: Copy Constructor
DAG(String, String) - Constructor for class edu.isi.pegasus.planner.dax.DAG: Create a DAG object
DAG(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.DAG: Create a DAG object
dagman - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
DAGMAN - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
DAX - Class in edu.isi.pegasus.planner.dax: Creates a DAX job object
DAX(DAX) - Constructor for class edu.isi.pegasus.planner.dax.DAX: Copy Constructor
DAX(String, String) - Constructor for class edu.isi.pegasus.planner.dax.DAX: Create a DAX job object
DAX(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.DAX: Create a DAX job object
Default - Class in edu.isi.pegasus.planner.selector.replica: The default replica selector that is used if non is specified by the user.
Default(PegasusProperties) - Constructor for class edu.isi.pegasus.planner.selector.replica.Default: The overloaded constructor, that is called by load method.
DEFAULT_FORMAT - Static variable in class edu.isi.pegasus.planner.dax.ADAG: The default format to use for writing out the Abstract Workflow.
DEFAULT_NAME - Static variable in exception edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException: The default classname that is associated with the exception.
DEFAULT_NAME - Static variable in exception edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException: The default classname that is associated with the exception.
DEFAULT_NUMBER_OF_FREE_NODES - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The default number of nodes that are associated with a site if not found in the site catalog.
DEFAULT_PACKAGE_NAME - Static variable in class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory: The default package where the all the implementing classes provided with the VDS reside.
DEFAULT_PACKAGE_NAME - Static variable in class edu.isi.pegasus.planner.selector.site.SiteSelectorFactory: The default package where the all the implementing classes provided with the VDS reside.
DEFAULT_REPLICA_SELECTOR - Static variable in class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory: The name of the class in the DEFAULT package, that corresponds to the default replica selector.
DEFAULT_SITE_SELECTOR - Static variable in class edu.isi.pegasus.planner.selector.site.SiteSelectorFactory: The name of the class in the DEFAULT package, that corresponds to the default site selector.
description() - Method in class edu.isi.pegasus.planner.selector.replica.Default: Returns a short description of the replica selector.
description() - Method in class edu.isi.pegasus.planner.selector.replica.Local: Returns a short description of the replica selector.
description() - Method in class edu.isi.pegasus.planner.selector.replica.Regex: Returns a short description of the replica selector.
description() - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a short description of the replica selector.
description() - Method in interface edu.isi.pegasus.planner.selector.ReplicaSelector: Returns a short description of the replica selector, that is being implemented by the implementing class.
description() - Method in class edu.isi.pegasus.planner.selector.site.Group: Returns the description of the site selector.
description() - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: This method returns a String describing the site selection technique that is being implemented by the implementing class.
description() - Method in class edu.isi.pegasus.planner.selector.site.Heft: This method returns a String describing the site selection technique that is being implemented by the implementing class.
description() - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Returns a brief description of the site selection technique implemented by this class.
description() - Method in class edu.isi.pegasus.planner.selector.site.Random: Returns a brief description of the site selection technique being used.
description() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin: Returns a brief description of the site selection techinque implemented by this class.
description() - Method in interface edu.isi.pegasus.planner.selector.SiteSelector: This method returns a String describing the site selection technique that is being implemented by the implementing class.
Diamond - Class in edu.isi.pegasus.planner.dax.examples: An example class to highlight how to use the JAVA DAX API to generate a diamond DAX.
Diamond() - Constructor for class edu.isi.pegasus.planner.dax.examples.Diamond
Diamond() - Static method in class edu.isi.pegasus.planner.dax.ADAG
DOWNWARD_RANK - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The constant to be passed to the accessor functions to get or set the downward rank for a node.

E

Edge - Class in edu.isi.pegasus.planner.dax
Edge(Edge) - Constructor for class edu.isi.pegasus.planner.dax.Edge
Edge(String, String) - Constructor for class edu.isi.pegasus.planner.dax.Edge
Edge(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Edge
edu.isi.pegasus.planner.dax - package edu.isi.pegasus.planner.dax
edu.isi.pegasus.planner.dax.examples - package edu.isi.pegasus.planner.dax.examples
edu.isi.pegasus.planner.selector - package edu.isi.pegasus.planner.selector: Provides the interface and call-out to the site selector mechanism.
edu.isi.pegasus.planner.selector.replica - package edu.isi.pegasus.planner.selector.replica
edu.isi.pegasus.planner.selector.site - package edu.isi.pegasus.planner.selector.site
edu.isi.pegasus.planner.selector.site.heft - package edu.isi.pegasus.planner.selector.site.heft
edu.isi.pegasus.planner.selector.transformation - package edu.isi.pegasus.planner.selector.transformation
end - edu.isi.pegasus.planner.dax.Invoke.WHEN
env - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
ENV - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
equals(Object) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
equals(Object) - Method in class edu.isi.pegasus.planner.dax.Edge
equals(Object) - Method in class edu.isi.pegasus.planner.dax.Executable: Compares whether an object is equal to this instance of Executable or not
equals(Object) - Method in class edu.isi.pegasus.planner.dax.File: Check if this File is equal to Object o
equals(Object) - Method in class edu.isi.pegasus.planner.dax.Invoke: Matches two Invoke objects
equals(Object) - Method in class edu.isi.pegasus.planner.dax.Transformation: Returns boolean indicating whether this instance of object is equal to the object being passed
error - edu.isi.pegasus.planner.dax.Invoke.WHEN
Executable - Class in edu.isi.pegasus.planner.dax: The Transformation Catalog object the represent the entries in the DAX transformation section.
Executable(Executable) - Constructor for class edu.isi.pegasus.planner.dax.Executable: Copy Constructor
Executable(String) - Constructor for class edu.isi.pegasus.planner.dax.Executable: Create a new executable
Executable(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Executable: Create a new Executable
Executable.ARCH - Enum in edu.isi.pegasus.planner.dax: ARCH Types
Executable.OS - Enum in edu.isi.pegasus.planner.dax: OS Types

F

FALSE - edu.isi.pegasus.planner.dax.File.TRANSFER
File - Class in edu.isi.pegasus.planner.dax: This class is the container for any File object, either the RC section, or uses
File(File) - Constructor for class edu.isi.pegasus.planner.dax.File: Copy constructor
File(File, File.LINK) - Constructor for class edu.isi.pegasus.planner.dax.File: Copy constructor, but change the linkage of the file.
File(String) - Constructor for class edu.isi.pegasus.planner.dax.File: Create new file object
File(String, File.LINK) - Constructor for class edu.isi.pegasus.planner.dax.File: Create new file object
File(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.File: Create new File object
File(String, String, String, File.LINK) - Constructor for class edu.isi.pegasus.planner.dax.File: Create a new file object
FILE_DELIMITER - Static variable in class edu.isi.pegasus.planner.dax.AbstractJob
FILE_URLS_PRIORITY_KEY - Static variable in class edu.isi.pegasus.planner.selector.replica.Default
File.JsonSerializer - Class in edu.isi.pegasus.planner.dax: Custom serializer for YAML representation of a File
File.LINK - Enum in edu.isi.pegasus.planner.dax: The linkages that a file can be of
File.TRANSFER - Enum in edu.isi.pegasus.planner.dax: Three Transfer modes supported, Transfer this file, don't transfer or stageout as well as optional.
FORMAT() - Constructor for enum edu.isi.pegasus.planner.dax.ADAG.FORMAT

G

generate(String, String) - Method in class edu.isi.pegasus.planner.dax.examples.Diamond
get(Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: Returns an objects corresponding to the key passed.
getAbstractJob(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns an abstract Job with id ajobid if present otherwise null.
getArchitecture() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the architecture the Executable is compiled for
getArguments() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Return the argument List.
getAvailableProcessors() - Method in class edu.isi.pegasus.planner.selector.site.heft.Site: Returns the number of available processors.
getAvailableTime(long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Processor: Returns the earliest time the processor is available for scheduling a job.
getAvailableTime(long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Site: Returns the earliest time the site is available for scheduling a job.
getAvailableTime(String, long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Returns the available time for a site.
getChild() - Method in class edu.isi.pegasus.planner.dax.Edge
getCount() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns the total count of the dax collection.
getDAG(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a DAG object with id dagid if present otherwise null.
getDAGs() - Method in class edu.isi.pegasus.planner.dax.ADAG: Get a list of all the DAG jobs.
getDAX(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a DAX object with id daxid if present otherwise null.
getDAXs() - Method in class edu.isi.pegasus.planner.dax.ADAG: Get a list of all the DAX jobs.
getEdges() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a Set of all the Edge objects for the DAX.Returns empty if no dependencies.
getEdges(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a list of Edge objects for a child job/dax/dag id.
getEnvArrFromMap() - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Generates an array of environment variables.
getExecutable() - Method in class edu.isi.pegasus.planner.dax.File: Check if the file is an executable
getExecutables() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a set of Executable Objects stored as part of the inDAX Transformation Catalog;
getExpectedRuntime(Job, TransformationCatalogEntry) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Return expected runtime.
getExpectedRuntimeFromAC(Job, TransformationCatalogEntry) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Return expected runtime from the AC only if the process catalog is initialized.
getFiles() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a list of File objects defined as the inDax Replica Catalog
getFloatValue(Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: A convenience method to get the intValue for the object passed.
getFreeNodesForSite(String) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Returns the freenodes for a site.
getGlibc() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the Glibc version if any set for this file.
getId() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getIndex() - Method in class edu.isi.pegasus.planner.dax.ADAG
getInstalled() - Method in class edu.isi.pegasus.planner.dax.Executable: Check if the executable is of type installed.
getIntValue(Object) - Method in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: A convenience method to get the intValue for the object passed.
getInvoke() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Returns list of Invoke objects
getInvoke() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a list of Invoke objects associated with the workflow
getInvoke() - Method in class edu.isi.pegasus.planner.dax.Executable: Return the list of Notification objects
getInvoke() - Method in class edu.isi.pegasus.planner.dax.Transformation: Return the list of Notification objects
getJob(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a Job object with id jobid if present otherwise null.
getJobs() - Method in class edu.isi.pegasus.planner.dax.ADAG: Get a list of all the DAG jobs.
getKeepTMPValue(String) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Returns the int value corresponding to the string value passed.
getKey() - Method in class edu.isi.pegasus.planner.dax.MetaData: Get the key of this metadata object
getKey() - Method in class edu.isi.pegasus.planner.dax.Profile: Get the key of this Profile
getLabel() - Method in class edu.isi.pegasus.planner.dax.Edge
getLink() - Method in class edu.isi.pegasus.planner.dax.File: Get the linkage of the file.
getMakespan() - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Returns the makespan of the scheduled workflow.
getMetaData() - Method in class edu.isi.pegasus.planner.dax.CatalogType: Returns the List of MetaData objects associated with this Catalog entry object
getMetaData(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Returns the metadata associated for a key if exists, else null
getMetaData(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns the metadata associated for a key if exists, else null
getName() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getName() - Method in class edu.isi.pegasus.planner.dax.ADAG: Return the name/label of the dax
getName() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the name of the executable
getName() - Method in class edu.isi.pegasus.planner.dax.File: Get the name of the file
getName() - Method in class edu.isi.pegasus.planner.dax.Transformation: Get the name of the transformation
getName() - Method in class edu.isi.pegasus.planner.selector.site.heft.Site: Returns the name of the site.
getName() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Returns the key of this pair, i.e the left hand side of the mapping.
getNamespace() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the namespace of the executable
getNamespace() - Method in class edu.isi.pegasus.planner.dax.File: Get the namespace of the file
getNamespace() - Method in class edu.isi.pegasus.planner.dax.Job
getNamespace() - Method in class edu.isi.pegasus.planner.dax.Transformation: Get the namespace of the transformation
getNameSpace() - Method in class edu.isi.pegasus.planner.dax.Profile: Get the namespace of this profile
getNodeLabel() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getNotification() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Same as getInvoke().
getNotification() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a list of Invoke objects associated with the workflow.
getNotification() - Method in class edu.isi.pegasus.planner.dax.Executable: Return the list of Notification objects (same as getInvoke)
getNotification() - Method in class edu.isi.pegasus.planner.dax.Transformation: Return the list of Notification objects (same as getInvoke()
getOptional() - Method in class edu.isi.pegasus.planner.dax.File: Check the optional flag of the file
getOS() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the OS the Executable is compiled for
getOsRelease() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the OS release set for this executable.
getOsVersion() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the OS version set for this executable.
getParent() - Method in class edu.isi.pegasus.planner.dax.Edge
getPegasusVendorExtensions() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns pegasus vendor extensions that we encode in each workflow
getPhysicalFiles() - Method in class edu.isi.pegasus.planner.dax.CatalogType: Returns a List of PFN objects associated with this Catalog entry
getPriority() - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Returns the priority
getProfiles() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Return the profile List.
getProfiles() - Method in class edu.isi.pegasus.planner.dax.CatalogType: Return the List of Profile objects associated with this Catalog entry
getProfiles() - Method in class edu.isi.pegasus.planner.dax.PFN
getProperty(String, String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns the name of the property, for a particular site X.
getRank() - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Returns the rank associated with it.
getRegex() - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Returns the underlying regex pattern associated with the Rank object.
getRegexSet(Properties) - Method in class edu.isi.pegasus.planner.selector.replica.Regex: Returns a sorted set containing the various Patterns pre-compiled.
getRegister() - Method in class edu.isi.pegasus.planner.dax.File: Get the register flag of this file.
getRequirements() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the set of executables that this executable requires
getSite() - Method in class edu.isi.pegasus.planner.dax.PFN
getSitesSet(String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a set of third party sites.
getSize() - Method in class edu.isi.pegasus.planner.dax.File: Return the size of the file
getStderr() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getStdin() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Get the STDIN file object
getStdout() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getTCEntry(List<TransformationCatalogEntry>, String) - Method in class edu.isi.pegasus.planner.selector.transformation.Installed: Returns a list of TransformationCatalogEntry objects of type installed from a List of valid TCEntries
getTCEntry(List<TransformationCatalogEntry>, String) - Method in class edu.isi.pegasus.planner.selector.transformation.Random: This method randomly selects one of the records from numerous valid Transformation Catalog Entries returned by the TCMapper.
getTCEntry(List<TransformationCatalogEntry>, String) - Method in class edu.isi.pegasus.planner.selector.transformation.Staged: Takes a list of TransformationCatalogEntry objects and returns 1 or many TransformationCatalogEntry objects as a list by selecting only Static stageable binary's
getTCEntry(List<TransformationCatalogEntry>, String) - Method in class edu.isi.pegasus.planner.selector.transformation.Submit: This method returns a list of TransformationCatalogEntry objects of type STATIC_BINARY and only available on the Submit machine( "local" site).
getTCEntry(List<TransformationCatalogEntry>, String) - Method in class edu.isi.pegasus.planner.selector.TransformationSelector: Takes a list of TransformationCatalogEntry objects and returns 1 or many TransformationCatalogEntry objects as a list depending on the type of selection algorithm.
getTempFilename() - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Creates a temporary file and obtains its name.
getTransfer() - Method in class edu.isi.pegasus.planner.dax.File: Get the transfer type of the file
getTransformations() - Method in class edu.isi.pegasus.planner.dax.ADAG: Returns a set of Transformation Objects (complex executables) stored in the DAX based Transformation Catalog
getType() - Method in class edu.isi.pegasus.planner.dax.MetaData: Get the type of the metdata object
getURL() - Method in class edu.isi.pegasus.planner.dax.PFN
getUses() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
getUses() - Method in class edu.isi.pegasus.planner.dax.Transformation: Get the List of files and/or executables being used by the transformation
getValue() - Method in class edu.isi.pegasus.planner.dax.MetaData: Get the value of the metdata object
getValue() - Method in class edu.isi.pegasus.planner.dax.Profile: Get the value of this profile
getValue() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Returns the value associated with this pair.
getVersion() - Method in class edu.isi.pegasus.planner.dax.Executable: Get the version of the executable
getVersion() - Method in class edu.isi.pegasus.planner.dax.File: Get the version of the file
getVersion() - Method in class edu.isi.pegasus.planner.dax.Job
getVersion() - Method in class edu.isi.pegasus.planner.dax.Transformation: Get the version of the transformation
getWhat() - Method in class edu.isi.pegasus.planner.dax.Invoke: Get what to invoke
getWhen() - Method in class edu.isi.pegasus.planner.dax.Invoke: Get when to Invoke
globallyIgnored(String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a boolean indicating whether a site is to be ignored as a replica source for all compute sites.
globallyPreferred(String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a boolean indicating whether a site is a preferred replica source for all compute sites.
globus - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
GLOBUS - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
Group - Class in edu.isi.pegasus.planner.selector.site: A site selector than ends up doing grouping jobs together on the basis of an identifier specifed in the dax for the jobs, and schedules them on to the same site.
Group() - Constructor for class edu.isi.pegasus.planner.selector.site.Group: The default constructor.

H

hashCode() - Method in class edu.isi.pegasus.planner.dax.AbstractJob
hashCode() - Method in class edu.isi.pegasus.planner.dax.Edge
hashCode() - Method in class edu.isi.pegasus.planner.dax.Executable
hashCode() - Method in class edu.isi.pegasus.planner.dax.File: HashCode of this File
hashCode() - Method in class edu.isi.pegasus.planner.dax.Transformation: Return the hashcode
Heft - Class in edu.isi.pegasus.planner.selector.site: The HEFT based site selector.
Heft() - Constructor for class edu.isi.pegasus.planner.selector.site.Heft: The default constructor.
HeftBag - Class in edu.isi.pegasus.planner.selector.site.heft: A data class that implements the Bag interface and stores the extra information that is required by the HEFT algorithm for each node.
HeftBag() - Constructor for class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The default constructor.
HeftGraphNodeComparator - Class in edu.isi.pegasus.planner.selector.site.heft: Comparator for GraphNode objects that allow us to sort on basis of the downward rank computed.
HeftGraphNodeComparator() - Constructor for class edu.isi.pegasus.planner.selector.site.heft.HeftGraphNodeComparator
HEFTINFO - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: Array storing the names of the attributes that are stored with the site.
HIGHEST_RANK_VALUE - Static variable in class edu.isi.pegasus.planner.selector.replica.Regex: The highest value of rank.
hints - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
HINTS - edu.isi.pegasus.planner.dax.Profile.NAMESPACE

I

ia64 - edu.isi.pegasus.planner.dax.Executable.ARCH
IA64 - edu.isi.pegasus.planner.dax.Executable.ARCH
ignore(String, String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a boolean indicating whether a source site is to be ignored for staging to a destination site
increment() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Increments the int value by one.
initialiseList(List) - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin: It initialises the internal list.
initialize(PegasusBag) - Method in class edu.isi.pegasus.planner.selector.site.Abstract: Initializes the site selector.
initialize(PegasusBag) - Method in class edu.isi.pegasus.planner.selector.site.Group: Initializes the site selector.
initialize(PegasusBag) - Method in class edu.isi.pegasus.planner.selector.site.Heft: Initializes the site selector.
initialize(PegasusBag) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Initializes the site selector.
initialize(PegasusBag) - Method in class edu.isi.pegasus.planner.selector.site.Random: Initializes the site selector.
initialize(PegasusBag) - Method in interface edu.isi.pegasus.planner.selector.SiteSelector: Initializes the site selector.
inout - edu.isi.pegasus.planner.dax.File.LINK
INOUT - edu.isi.pegasus.planner.dax.File.LINK
input - edu.isi.pegasus.planner.dax.File.LINK
INPUT - edu.isi.pegasus.planner.dax.File.LINK
insert(Job) - Method in class edu.isi.pegasus.planner.selector.site.Group: Inserts the job into the group map.
Installed - Class in edu.isi.pegasus.planner.selector.transformation: This implementation of the Selector returns a list of TransformationCatalogEntry objects of type INSTALLED.
Installed() - Constructor for class edu.isi.pegasus.planner.selector.transformation.Installed
Invoke - Class in edu.isi.pegasus.planner.dax: The Notification invoke object for the Dax API
Invoke(Invoke) - Constructor for class edu.isi.pegasus.planner.dax.Invoke: Copy Constructor
Invoke(Invoke.WHEN) - Constructor for class edu.isi.pegasus.planner.dax.Invoke: Crete a new Invoke object
Invoke(Invoke.WHEN, String) - Constructor for class edu.isi.pegasus.planner.dax.Invoke: Create a new Invoke object
Invoke.JsonSerializer - Class in edu.isi.pegasus.planner.dax: Custom serializer for YAML representation of an Invoke (Hook in 5.0)
Invoke.WHEN - Enum in edu.isi.pegasus.planner.dax: WHEN To INVOKE
isDAG() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Is this Object a DAG
isDAG() - Method in class edu.isi.pegasus.planner.dax.DAG: Is this Object a DAG
isDAX() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Is this Object a DAX
isDAX() - Method in class edu.isi.pegasus.planner.dax.DAX: Is this Object a DAX
isExecutable() - Method in class edu.isi.pegasus.planner.dax.CatalogType
isExecutable() - Method in class edu.isi.pegasus.planner.dax.Executable: Return boolean indicating whether executable or not
isFile() - Method in class edu.isi.pegasus.planner.dax.CatalogType
isFile() - Method in class edu.isi.pegasus.planner.dax.File: Boolean indicating whether is of type file
isJob() - Method in class edu.isi.pegasus.planner.dax.AbstractJob: Is this Object a Job
isJob() - Method in class edu.isi.pegasus.planner.dax.Job: Is this Object a Job
isNodeIdValid(String) - Static method in class edu.isi.pegasus.planner.dax.Patterns
isValid(Pattern, String) - Static method in class edu.isi.pegasus.planner.dax.Patterns
isVersionValid(String) - Static method in class edu.isi.pegasus.planner.dax.Patterns

J

Job - Class in edu.isi.pegasus.planner.dax
Job(Job) - Constructor for class edu.isi.pegasus.planner.dax.Job
Job(String, String) - Constructor for class edu.isi.pegasus.planner.dax.Job
Job(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Job
Job(String, String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Job
Job(String, String, String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Job
JOBTYPE - Static variable in class edu.isi.pegasus.planner.dax.AbstractJob
JsonSerializer() - Constructor for class edu.isi.pegasus.planner.dax.AbstractJob.JsonSerializer
JsonSerializer() - Constructor for class edu.isi.pegasus.planner.dax.ADAG.JsonSerializer
JsonSerializer() - Constructor for class edu.isi.pegasus.planner.dax.File.JsonSerializer
JsonSerializer() - Constructor for class edu.isi.pegasus.planner.dax.Invoke.JsonSerializer
JsonSerializer() - Constructor for class edu.isi.pegasus.planner.dax.MetaData.JsonSerializer

K

KEEP_ALWAYS - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The state denoting always to keep the temporary files.
KEEP_NEVER - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The state denoting never to keep the temporary files.
KEEP_ONERROR - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The state denoting to keep the temporary files only in case of error.

L

LINK() - Constructor for enum edu.isi.pegasus.planner.dax.File.LINK
linux - edu.isi.pegasus.planner.dax.Executable.OS
LINUX - edu.isi.pegasus.planner.dax.Executable.OS
listToString(List) - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin
loadEnvironmentVariables() - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Initializes the internal hash that collects environment variables.
loadInstance() - Static method in class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory: A no hassle factory method that loads the replica selector specified in the properties.
loadInstance(PegasusBag) - Static method in class edu.isi.pegasus.planner.selector.site.SiteSelectorFactory: Loads the implementing class corresponding to the mode specified by the user at runtime in the properties file.
loadInstance(PegasusProperties) - Static method in class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory: Loads the implementing class corresponding to the mode specified by the user at runtime in the properties file.
loadInstance(PegasusProperties, String) - Static method in class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory: Loads the implementing class corresponding to the class.
loadTXSelector(String) - Static method in class edu.isi.pegasus.planner.selector.TransformationSelector: Loads the implementing class corresponding to the mode specified by the user at runtime in the properties file.
Local - Class in edu.isi.pegasus.planner.selector.replica: This replica selector only prefers replicas from the local host and that start with a file: URL scheme.
Local(PegasusProperties) - Constructor for class edu.isi.pegasus.planner.selector.replica.Local: The overloaded constructor, that is called by load method.
LOCAL_SITE_HANDLE - Static variable in interface edu.isi.pegasus.planner.selector.ReplicaSelector: The local site handle.
LOWEST_RANK_VALUE - Static variable in class edu.isi.pegasus.planner.selector.replica.Regex: The lowest rank value

M

mAbstractDag - Variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The abstract DAG.
macosx - edu.isi.pegasus.planner.dax.Executable.OS
MACOSX - edu.isi.pegasus.planner.dax.Executable.OS
main(String[]) - Static method in class edu.isi.pegasus.planner.dax.ADAG: Create an example DIAMOND DAX
main(String[]) - Static method in class edu.isi.pegasus.planner.dax.examples.Diamond: Create an example DIAMOND DAX
main(String[]) - Static method in class edu.isi.pegasus.planner.dax.examples.Pipeline
main(String[]) - Static method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The main program that allows you to test.
mapJob(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.AbstractPerJob: Maps a job in the workflow to the various grid sites.
mapJob(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Calls out to the external site selector.
mapJob(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.Random: Maps a job in the workflow to an execution site.
mapJob(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin: Maps a job in the workflow to an execution site.
mapJob2ExecPool(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The call out to the site selector to determine on what pool the job should be scheduled.
mapWorkflow(ADag, List) - Method in class edu.isi.pegasus.planner.selector.site.AbstractPerJob: Maps the jobs in the workflow to the various grid sites.
mapWorkflow(ADag, List) - Method in class edu.isi.pegasus.planner.selector.site.Group: The call out to map a list of jobs on to the execution pools.
mapWorkflow(ADag, List) - Method in class edu.isi.pegasus.planner.selector.site.Heft: Maps the jobs in the workflow to the various grid sites.
mapWorkflow(ADag, List) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Maps the jobs in the workflow to the various grid sites.
mapWorkflow(ADag, List) - Method in interface edu.isi.pegasus.planner.selector.SiteSelector: Maps the jobs in the workflow to the various grid sites.
mapWorkflow(ADag, List, String) - Method in class edu.isi.pegasus.planner.selector.site.Heft: Maps the jobs in the workflow to the various grid sites.
mArch - Variable in class edu.isi.pegasus.planner.dax.Executable: Architecture the executable is compiled for
mArguments - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
matches(String) - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Matches a string against the compiled regex expression
mAverageCommunicationCost - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The average communication cost between nodes.
mAvgComputeTime - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The average compute time for a node.
MAXIMUM_FINISH_TIME - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The maximum finish time possible for a job.
mBag - Variable in class edu.isi.pegasus.planner.selector.site.Abstract: The bag of Pegasus objects.
mChild - Variable in class edu.isi.pegasus.planner.dax.Edge: The parent of the child
mCount - Variable in class edu.isi.pegasus.planner.dax.ADAG: The Count of the number of dax objects : N
mCurrentLevel - Variable in class edu.isi.pegasus.planner.selector.site.RoundRobin: The current level in the abstract workflow.
mCurrentProcessorIndex - Variable in class edu.isi.pegasus.planner.selector.site.heft.Site: The index to the processor that is to be used for scheduling a job.
mDefaultGroup - Static variable in class edu.isi.pegasus.planner.selector.site.Group: The name of the group into which jobs are grouped if no group is specified in the dax.
mDependencies - Variable in class edu.isi.pegasus.planner.dax.ADAG: Map of Dependencies between Job,DAX,DAG objects.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.replica.Default: A short description of the replica selector.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.replica.Local: A short description of the replica selector.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.replica.Regex: A short description of the replica selector.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.replica.Restricted: A short description of the replica selector.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.site.Group: The description of the site selector.
mDescription - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The description of the site selector.
mDownwardRank - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The downward rank for a node.
mEndTime - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The estimated end time for a job.
mEndTime - Variable in class edu.isi.pegasus.planner.selector.site.heft.Processor: The end time of the current scheduled job.
mEnvVar - Variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The map that contains the environment variables including the default ones that are set while calling out to the site selector unless they are overridden by the values set in the properties file.
MetaData - Class in edu.isi.pegasus.planner.dax: Metadata object for the DAX API
MetaData(MetaData) - Constructor for class edu.isi.pegasus.planner.dax.MetaData: Copy constructor
MetaData(String, String) - Constructor for class edu.isi.pegasus.planner.dax.MetaData: Create a new Metadata object
MetaData(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.MetaData: Create a new Metadata object
MetaData.JsonSerializer - Class in edu.isi.pegasus.planner.dax: Custom serializer for YAML representation of a MetaData k,v pair
mExecPools - Variable in class edu.isi.pegasus.planner.selector.site.RoundRobin: The list of pools that have been given by the user at run time or has been authenticated against.
mExecutable - Variable in class edu.isi.pegasus.planner.dax.File: Is the file an executable.
mExecutables - Variable in class edu.isi.pegasus.planner.dax.ADAG: The list of Executable objects
mFiles - Variable in class edu.isi.pegasus.planner.dax.ADAG: The list of edu.isi.pegasus.planner.dax.File objects
mGlibc - Variable in class edu.isi.pegasus.planner.dax.Executable: Glibc the executable is compiled for
mGlobalIgnoredSites - Variable in class edu.isi.pegasus.planner.selector.replica.Restricted: The Set of ignored sites, that are ignored for selecting replicas for all sites.
mGlobalPreferredSites - Variable in class edu.isi.pegasus.planner.selector.replica.Restricted: The set of preferred sites, that are preferred stagein sites for all sites.
mGroupMap - Variable in class edu.isi.pegasus.planner.selector.site.Group: The map containing the the jobs grouped by the key group.
mHeftImpl - Variable in class edu.isi.pegasus.planner.selector.site.Heft: An instance of the class that implements the HEFT algorithm.
mId - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mIgnoredSitesMap - Variable in class edu.isi.pegasus.planner.selector.replica.Restricted: A Map indexed by site handles, that contains a set of site handles.
mIndex - Variable in class edu.isi.pegasus.planner.dax.ADAG: The Index of the dax object.
mInstalled - Variable in class edu.isi.pegasus.planner.dax.Executable: Flag to mark if the executable is installed or can be staged.
mInvokes - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mInvokes - Variable in class edu.isi.pegasus.planner.dax.ADAG: List of Notification objects
mInvokes - Variable in class edu.isi.pegasus.planner.dax.Executable: List of Notification objects
mInvokes - Variable in class edu.isi.pegasus.planner.dax.Transformation
mJobs - Variable in class edu.isi.pegasus.planner.dax.ADAG: The List of Job,DAX and DAG objects
mKeepTMP - Variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The tristate value for whether keeping the temporary files generated or not.
mKey - Variable in class edu.isi.pegasus.planner.dax.MetaData: Metadata Key
mKey - Variable in class edu.isi.pegasus.planner.dax.Profile: Key of the profile
mLabel - Variable in class edu.isi.pegasus.planner.dax.Edge: The edge label for the parent child relationship.
mLabel - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The label of the workflow.
mLDAGs - Variable in class edu.isi.pegasus.planner.dax.ADAG
mLDAXs - Variable in class edu.isi.pegasus.planner.dax.ADAG
mLink - Variable in class edu.isi.pegasus.planner.dax.File
mLJobs - Variable in class edu.isi.pegasus.planner.dax.ADAG
mLogger - Static variable in class edu.isi.pegasus.planner.dax.AbstractJob
mLogger - Variable in class edu.isi.pegasus.planner.dax.ADAG
mLogger - Variable in class edu.isi.pegasus.planner.dax.CatalogType
mLogger - Variable in class edu.isi.pegasus.planner.selector.replica.Default: The handle to the logging object that is used to log the various debug messages.
mLogger - Variable in class edu.isi.pegasus.planner.selector.replica.Local: The handle to the logging object that is used to log the various debug messages.
mLogger - Variable in class edu.isi.pegasus.planner.selector.site.Abstract: The handle to the logger.
mLogger - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The handle to the LogManager
mLogger - Variable in class edu.isi.pegasus.planner.selector.TransformationSelector
mMetadata - Variable in class edu.isi.pegasus.planner.dax.CatalogType
mMetaDataAttributes - Variable in class edu.isi.pegasus.planner.dax.AbstractJob: The metadata attributes associated with the whole workflow.
mMetaDataAttributes - Variable in class edu.isi.pegasus.planner.dax.ADAG: The metadata attributes associated with the whole workflow.
mName - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mName - Variable in class edu.isi.pegasus.planner.dax.ADAG: The Name / Label of the DAX
mName - Variable in class edu.isi.pegasus.planner.dax.Executable: Name of the executable
mName - Variable in class edu.isi.pegasus.planner.dax.File: The logical name of the file.
mName - Variable in class edu.isi.pegasus.planner.dax.Transformation: Name of the transformation
mName - Variable in class edu.isi.pegasus.planner.selector.site.heft.Site: The logical name assigned to the site.
mNamespace - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mNamespace - Variable in class edu.isi.pegasus.planner.dax.Executable: Namespace of the executable
mNamespace - Variable in class edu.isi.pegasus.planner.dax.File: The namespace on a file.
mNamespace - Variable in class edu.isi.pegasus.planner.dax.Profile: Namespace of the profile
mNamespace - Variable in class edu.isi.pegasus.planner.dax.Transformation: Namespace of the Transformation
mNodeIdPattern - Static variable in class edu.isi.pegasus.planner.dax.Patterns
mNodeLabel - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mNumProcessors - Variable in class edu.isi.pegasus.planner.selector.site.heft.Site: The number of processors making up a site.
mOptional - Variable in class edu.isi.pegasus.planner.dax.File: Is the file optional
mOs - Variable in class edu.isi.pegasus.planner.dax.Executable: Os the executable is compiled for
mOsRelease - Variable in class edu.isi.pegasus.planner.dax.Executable: Os release the executable is compiled for
mOsVersion - Variable in class edu.isi.pegasus.planner.dax.Executable: OS version the executable is compiled for
mParent - Variable in class edu.isi.pegasus.planner.dax.Edge: The parent of the parent
mPattern - Variable in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: The compiled regex expression
mPFNs - Variable in class edu.isi.pegasus.planner.dax.CatalogType
mPreferredSitesMap - Variable in class edu.isi.pegasus.planner.selector.replica.Restricted: A Map indexed by site handles, that contains a set of site handles.
mPriority - Variable in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: The inverse of rank.
mProcessors - Variable in class edu.isi.pegasus.planner.selector.site.heft.Site: A list of processors making up the site.
mProfiles - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mProfiles - Variable in class edu.isi.pegasus.planner.dax.CatalogType
mProfiles - Variable in class edu.isi.pegasus.planner.dax.PFN
mProps - Variable in class edu.isi.pegasus.planner.selector.replica.Default: The properties object containing the properties passed to the planner.
mProps - Variable in class edu.isi.pegasus.planner.selector.replica.Local: The properties object containing the properties passed to the planner.
mProps - Variable in class edu.isi.pegasus.planner.selector.site.Abstract: The properties passed to Pegasus at runtime.
mProps - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The handle to the properties.
mRank - Variable in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: The rank value.
mRegister - Variable in class edu.isi.pegasus.planner.dax.File: Should the file be registered in the replica catalog
mRequestID - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The request id associated with the DAX.
mRequires - Variable in class edu.isi.pegasus.planner.dax.Executable: Other executables this executable requires
mScheduledSite - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The site where a job is scheduled to run.
mSelector - Variable in class edu.isi.pegasus.planner.selector.site.Group: The handle to the internal site selector that is used to schedule jobs amongst the groups.
mSite - Variable in class edu.isi.pegasus.planner.dax.PFN
mSiteMap - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Map containing the number of free nodes for each site.
mSites - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The list of sites where the workflow can run.
mSiteSelectorPath - Variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The path to the site selector.
mSiteStore - Variable in class edu.isi.pegasus.planner.selector.site.Abstract: The handle to the site catalog.
mSiteStore - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Handle to the site catalog.
mSize - Variable in class edu.isi.pegasus.planner.dax.File: File size of the file no units required
mSortedRegexSet - Variable in class edu.isi.pegasus.planner.selector.replica.Regex: The Set of regular expressions that orders the regex expressions to use in ascending order.
mStartTime - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The estimated start time for a job.
mStartTime - Variable in class edu.isi.pegasus.planner.selector.site.heft.Processor: The start time of the current scheduled job.
mStderr - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mStdin - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mStdout - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mTCHandle - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The handle to the transformation catalog.
mTCMapper - Variable in class edu.isi.pegasus.planner.selector.site.Abstract: The handle to the TCMapper object.
mTCMapper - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Handle to the TCMapper.
mTimeout - Variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The timeout value in seconds after which to timeout, in the case where the external site selector does nothing (nothing on stdout nor stderr).
mTransfer - Variable in class edu.isi.pegasus.planner.dax.File: Should the file be transferred on generation.
mTransformations - Variable in class edu.isi.pegasus.planner.dax.ADAG: The List of Transformation objects
mType - Variable in class edu.isi.pegasus.planner.dax.MetaData: Metadata type
mUpwardRank - Variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The upward rank for a node.
mURL - Variable in class edu.isi.pegasus.planner.dax.PFN
mUses - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mUses - Variable in class edu.isi.pegasus.planner.dax.Transformation: List of executable of files used by the transformation
mValue - Variable in class edu.isi.pegasus.planner.dax.MetaData: Metadata value
mValue - Variable in class edu.isi.pegasus.planner.dax.Profile: Value of the profile
mVersion - Variable in class edu.isi.pegasus.planner.dax.AbstractJob
mVersion - Variable in class edu.isi.pegasus.planner.dax.Executable: Version of the executable
mVersion - Variable in class edu.isi.pegasus.planner.dax.File: The logical version of the file.
mVersion - Variable in class edu.isi.pegasus.planner.dax.Transformation: Version of the transformation
mVersionPattern - Static variable in class edu.isi.pegasus.planner.dax.Patterns
mWhat - Variable in class edu.isi.pegasus.planner.dax.Invoke: What to invoke
mWhen - Variable in class edu.isi.pegasus.planner.dax.Invoke: WHen to Invoke
mWorkflow - Variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The workflow in the graph format, that needs to be scheduled.
mWriter - Variable in class edu.isi.pegasus.planner.dax.ADAG: Handle the XML writer

N

name - Variable in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Stores the name of the pair (the left handside of the mapping).
NAMESPACE() - Constructor for enum edu.isi.pegasus.planner.dax.Profile.NAMESPACE
NameValue() - Constructor for class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: The default constructor which initialises the class member variables.
NameValue(String, int) - Constructor for class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Initialises the class member variables to the values passed in the arguments.
never - edu.isi.pegasus.planner.dax.Invoke.WHEN
NON_PREFERRED_SITE_PRIORITY_KEY - Static variable in class edu.isi.pegasus.planner.selector.replica.Default
NonJavaCallout - Class in edu.isi.pegasus.planner.selector.site: This is the class that implements a call-out to a site selector which is an application or executable script.
NonJavaCallout() - Constructor for class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The default constructor.

O

on_error - edu.isi.pegasus.planner.dax.Invoke.WHEN
on_success - edu.isi.pegasus.planner.dax.Invoke.WHEN
OPTIONAL - edu.isi.pegasus.planner.dax.File.TRANSFER
OS() - Constructor for enum edu.isi.pegasus.planner.dax.Executable.OS
output - edu.isi.pegasus.planner.dax.File.LINK
OUTPUT - edu.isi.pegasus.planner.dax.File.LINK

P

PACKAGE_NAME - Static variable in class edu.isi.pegasus.planner.selector.TransformationSelector
parseStdOut(Job, String) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Extracts the chosen site from the site selector's answer.
Patterns - Class in edu.isi.pegasus.planner.dax
Patterns() - Constructor for class edu.isi.pegasus.planner.dax.Patterns
pegasus - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
PEGASUS - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
PEGASUS_VENDOR_EXTENSION_KEY - Static variable in class edu.isi.pegasus.planner.dax.ADAG
PEGASUS_YAML_ABSTRACT_WF_VERSION - Static variable in class edu.isi.pegasus.planner.dax.ADAG
PFN - Class in edu.isi.pegasus.planner.dax
PFN() - Constructor for class edu.isi.pegasus.planner.dax.PFN
PFN(String) - Constructor for class edu.isi.pegasus.planner.dax.PFN
PFN(String, String) - Constructor for class edu.isi.pegasus.planner.dax.PFN
Pipeline - Class in edu.isi.pegasus.planner.dax.examples
Pipeline() - Constructor for class edu.isi.pegasus.planner.dax.examples.Pipeline
populateSiteMap(List) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Populates the number of free nodes for each site, by querying the Site Catalog.
populateSiteMaps(String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Builds up the set of preferred and ignored sites for a site.
ppc - edu.isi.pegasus.planner.dax.Executable.ARCH
PPC - edu.isi.pegasus.planner.dax.Executable.ARCH
ppc_64 - edu.isi.pegasus.planner.dax.Executable.ARCH
PPC_64 - edu.isi.pegasus.planner.dax.Executable.ARCH
ppc64le - edu.isi.pegasus.planner.dax.Executable.ARCH
prefer(String, String) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: Returns a boolean indicating whether a source site is to be preffered for staging to a destination site
PREFERRED_SITE_PRIORITY_KEY - Static variable in class edu.isi.pegasus.planner.selector.replica.Default
PREFIX_PROPERTIES - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The prefix of the property names that specify the environment variables that need to be set before calling out to the site selector.
PREFIX_TEMPORARY_FILE - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The prefix to be used while creating a temporary file to pass to the external siteselector.
prepareInputFile(Job, List) - Method in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: Writes job knowledge into the temporary file passed to the external site selector.
PRIORITY_KEY - Static variable in interface edu.isi.pegasus.planner.selector.ReplicaSelector: The attribute key that designates priority for the replica
PROCESS_CATALOG_IMPL_PROPERTY - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The property that designates which Process catalog impl to pick up.
Processor - Class in edu.isi.pegasus.planner.selector.site.heft: A data class that is used to simulate a processor on a site.
Processor() - Constructor for class edu.isi.pegasus.planner.selector.site.heft.Processor: The default constructor.
Profile - Class in edu.isi.pegasus.planner.dax: Profile Object for the DAX API
Profile(Profile) - Constructor for class edu.isi.pegasus.planner.dax.Profile: Copy constructor
Profile(Profile.NAMESPACE, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Profile: Create a new Profile object
Profile(String, String) - Constructor for class edu.isi.pegasus.planner.dax.Profile: Create a new Profile object
Profile(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Profile: Create a new Profile object
Profile.NAMESPACE - Enum in edu.isi.pegasus.planner.dax: Supported NAMESPACES.
PROPERTY_IGNORE_SUFFIX - Static variable in class edu.isi.pegasus.planner.selector.replica.Restricted: The property suffix for determining the ignored sites for a site x.
PROPERTY_PREFER_SUFFIX - Static variable in class edu.isi.pegasus.planner.selector.replica.Restricted: The property suffix for determining the preferred sites for a site x.
PROPERTY_PREFIX - Static variable in class edu.isi.pegasus.planner.selector.replica.Regex: The property prefix for all Regex rank property.
PROPERTY_PREFIX - Static variable in class edu.isi.pegasus.planner.selector.replica.Restricted: The property prefix for all properties used by this selector.

R

Random - Class in edu.isi.pegasus.planner.selector.site: A random site selector that maps to a job to a random pool, amongst the subset of pools where that particular job can be executed.
Random - Class in edu.isi.pegasus.planner.selector.transformation: This implemenation of the TCSelector selects a random TransformationCatalogEntry from a List of entries.
Random() - Constructor for class edu.isi.pegasus.planner.selector.site.Random: The default constructor.
Random() - Constructor for class edu.isi.pegasus.planner.selector.transformation.Random
Rank(int, String) - Constructor for class edu.isi.pegasus.planner.selector.replica.Regex.Rank: The default constructor.
Regex - Class in edu.isi.pegasus.planner.selector.replica: A replica selector that allows the user to specific regex expressions that can be used to rank various PFN's returned from the Replica Catalog for a particular LFN.
Regex(PegasusProperties) - Constructor for class edu.isi.pegasus.planner.selector.replica.Regex: The overloaded constructor, that is called by load method.
Regex.Rank - Class in edu.isi.pegasus.planner.selector.replica: A Data class that allows us to compile a regex expression and associate a rank value with it.
removeFileURL(ReplicaCatalogEntry, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Default: A convenience function that determines whether we should be removing a file URL from replica selection or not.
removeFileURL(String, String, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Default: A convenience function that determines whether we should be removing a file URL from replica selection or not.
ReplicaSelector - Interface in edu.isi.pegasus.planner.selector: A prototypical interface for a replica selector.
ReplicaSelectorFactory - Class in edu.isi.pegasus.planner.selector.replica: A factory class to load the appropriate type of Replica Selector, as specified by the user at runtime in properties.
ReplicaSelectorFactory() - Constructor for class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactory
ReplicaSelectorFactoryException - Exception in edu.isi.pegasus.planner.selector.replica: Class to notify of failures while instantiating ReplicaSelector implementations.
ReplicaSelectorFactoryException(String) - Constructor for exception edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException: Constructs a ReplicaSelectorFactoryException with no detail message.
ReplicaSelectorFactoryException(String, String) - Constructor for exception edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException: Constructs a ReplicaSelectorFactoryException with the specified detailed message.
ReplicaSelectorFactoryException(String, String, Throwable) - Constructor for exception edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException: Constructs a ReplicaSelectorFactoryException with the specified detailed message and a cause.
ReplicaSelectorFactoryException(String, Throwable) - Constructor for exception edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException: Constructs a ReplicaSelectorFactoryException with the specified detailed message and a cause.
Restricted - Class in edu.isi.pegasus.planner.selector.replica: A replica selector, that allows the user to specify good sites and bad sites for staging in data to a compute site.
Restricted(PegasusProperties) - Constructor for class edu.isi.pegasus.planner.selector.replica.Restricted: The overloaded constructor, that is called by load method.
RoundRobin - Class in edu.isi.pegasus.planner.selector.site: This ends up scheduling the jobs in a round robin manner.
RoundRobin() - Constructor for class edu.isi.pegasus.planner.selector.site.RoundRobin: The default constructor.
RoundRobin.NameValue - Class in edu.isi.pegasus.planner.selector.site: A inner name value class that associates a string with an int value.
RUNTIME_PROFILE_KEY - Static variable in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: The pegasus profile key that gives us the expected runtime.

S

SANITY_CHECK_ERROR_MESSAGE_PREFIX - Static variable in class edu.isi.pegasus.planner.selector.replica.Local: Sanity Check Error Message.
schedule(ADag, List) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Schedules the workflow using the heft.
schedule(ADag, List, String) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Schedules the workflow according to the HEFT algorithm.
SCHEDULED_SITE - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The site where the job is scheduled.
scheduleJob(long, long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Processor: Schedules a job on to a processor.
scheduleJob(long, long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Site: Schedules a job to the site.
scheduleJob(String, long, long) - Method in class edu.isi.pegasus.planner.selector.site.heft.Algorithm: Schedules a job to a site.
SCHEMA_LOCATION - Static variable in class edu.isi.pegasus.planner.dax.ADAG: The "not-so-official" location URL of the DAX schema definition.
SCHEMA_NAMESPACE - Static variable in class edu.isi.pegasus.planner.dax.ADAG: The "official" namespace URI of the site catalog schema.
SCHEMA_NAMESPACE_XSI - Static variable in class edu.isi.pegasus.planner.dax.ADAG: XSI SCHEMA NAMESPACE
SCHEMA_VERSION - Static variable in class edu.isi.pegasus.planner.dax.ADAG: The version to report.
selectAndOrderReplicas(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Default: This orders all valid location amongst all the locations returned by the Replica Mechanism.
selectAndOrderReplicas(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Local: This chooses a location amongst all the locations returned by the Replica Mechanism.
selectAndOrderReplicas(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Regex: This orders amongst all the valid locations returned by the Replica Mechanism.
selectAndOrderReplicas(ReplicaLocation, String, boolean) - Method in interface edu.isi.pegasus.planner.selector.ReplicaSelector: Select all candidate replicas for a LFN and order them.
selector - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
SELECTOR - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
selectRandomSite(List) - Method in class edu.isi.pegasus.planner.selector.site.Random: The random selection that selects randomly one of the records returned by the transformation catalog.
selectReplica(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Default: This chooses a location amongst all the locations returned by the replica location service.
selectReplica(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Local: Selects a random replica from all the replica's that have their site handle set to local and the pfn's start with a file url scheme.
selectReplica(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Regex: This chooses a location amongst all the locations returned by the replica location service.
selectReplica(ReplicaLocation, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Restricted: This chooses a location amongst all the locations returned by the replica location service.
selectReplica(ReplicaLocation, String, boolean) - Method in interface edu.isi.pegasus.planner.selector.ReplicaSelector: Selects a single replica amongst all the replicas returned by the implementing Replica Mechanism.
serialize(AbstractJob, JsonGenerator, SerializerProvider) - Method in class edu.isi.pegasus.planner.dax.AbstractJob.JsonSerializer
serialize(ADAG, JsonGenerator, SerializerProvider) - Method in class edu.isi.pegasus.planner.dax.ADAG.JsonSerializer: Serializes ADAG into YAML representation
serialize(File, JsonGenerator, SerializerProvider) - Method in class edu.isi.pegasus.planner.dax.File.JsonSerializer: Serialize a File into YAML representation
serialize(Invoke, JsonGenerator, SerializerProvider) - Method in class edu.isi.pegasus.planner.dax.Invoke.JsonSerializer: Serializes an Invoke into YAML representation.
serialize(MetaData, JsonGenerator, SerializerProvider) - Method in class edu.isi.pegasus.planner.dax.MetaData.JsonSerializer: Serializes a MetaData object in to YAML representation
setArchitecture(Executable.ARCH) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the architecture the executable is compiled for
setChild(String) - Method in class edu.isi.pegasus.planner.dax.Edge
setExecutable() - Method in class edu.isi.pegasus.planner.dax.File: Mark the file as executable.
setExecutable(boolean) - Method in class edu.isi.pegasus.planner.dax.File: Mark the file as executable.
setGlibc(String) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the glibc this executable is compiled for
setInstalled() - Method in class edu.isi.pegasus.planner.dax.Executable: set the installed flag on the executable.
setInstalled(boolean) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the installed flag on the executable.Default is installed
setLabel(String) - Method in class edu.isi.pegasus.planner.dax.Edge
setLink(File.LINK) - Method in class edu.isi.pegasus.planner.dax.File: Set the file linkage
setNodeLabel(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setOptional(boolean) - Method in class edu.isi.pegasus.planner.dax.File: Set the optional flag on the file.
setOS(Executable.OS) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the OS the executable is compiled for
setOSRelease(String) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the osrelease the executable is compiled for
setOSVersion(String) - Method in class edu.isi.pegasus.planner.dax.Executable: Set the osversion the executable is compiled for
setParent(String) - Method in class edu.isi.pegasus.planner.dax.Edge
setPriority(int) - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank
setRegister(boolean) - Method in class edu.isi.pegasus.planner.dax.File: Set the register flag of the file.
setSite(String) - Method in class edu.isi.pegasus.planner.dax.PFN
setSize(String) - Method in class edu.isi.pegasus.planner.dax.File: Set the size of the file.
setStderr(File) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(File, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(File, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(File, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(File, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(String, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(String, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(String, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStderr(String, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(File) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(File, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(File, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(File, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(File, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(String, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(String, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(String, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdin(String, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(File) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(File, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(File, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(File, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(File, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(String, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(String, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(String, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setStdout(String, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
setTransfer(File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.File: Set the transfer type of the file
setURL(String) - Method in class edu.isi.pegasus.planner.dax.PFN
setUseForPlanning() - Method in class edu.isi.pegasus.planner.dax.File: Mark the file to be used for planner.
setUseForPlanning(boolean) - Method in class edu.isi.pegasus.planner.dax.File: Mark the file to be used for planner.
setValue(int) - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: The set method to set the value.
setValue(String) - Method in class edu.isi.pegasus.planner.dax.MetaData: Set the value of the metadata
setValue(String) - Method in class edu.isi.pegasus.planner.dax.Profile: Set the value of this Profile
setWhat(String) - Method in class edu.isi.pegasus.planner.dax.Invoke: Set what executable to invoke and how
setWhen(Invoke.WHEN) - Method in class edu.isi.pegasus.planner.dax.Invoke: Set when to invoke
Site - Class in edu.isi.pegasus.planner.selector.site.heft: A data class that models a site as a collection of processors.
Site(String) - Constructor for class edu.isi.pegasus.planner.selector.site.heft.Site: The default constructor.
Site(String, int) - Constructor for class edu.isi.pegasus.planner.selector.site.heft.Site: The overloaded constructor.
SITE_NOT_FOUND - Static variable in interface edu.isi.pegasus.planner.selector.SiteSelector: The value for the pool handle, when the pool is not found.
SiteSelector - Interface in edu.isi.pegasus.planner.selector: The interface for the Site Selector.
SiteSelectorFactory - Class in edu.isi.pegasus.planner.selector.site: A factory class to load the appropriate type of Site Selector, as specified by the user at runtime in properties.
SiteSelectorFactory() - Constructor for class edu.isi.pegasus.planner.selector.site.SiteSelectorFactory
SiteSelectorFactoryException - Exception in edu.isi.pegasus.planner.selector.site: Class to notify of failures while instantiating SiteSelector implementations.
SiteSelectorFactoryException(String) - Constructor for exception edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException: Constructs a SiteSelectorFactoryException with no detail message.
SiteSelectorFactoryException(String, String) - Constructor for exception edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException: Constructs a SiteSelectorFactoryException with the specified detailed message.
SiteSelectorFactoryException(String, String, Throwable) - Constructor for exception edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException: Constructs a SiteSelectorFactoryException with the specified detailed message and a cause.
SiteSelectorFactoryException(String, Throwable) - Constructor for exception edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException: Constructs a SiteSelectorFactoryException with the specified detailed message and a cause.
SOLUTION_PREFIX - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The prefix that the site selector writes out on its stdout to designate that it is sending a solution.
sparcv7 - edu.isi.pegasus.planner.dax.Executable.ARCH
SPARCV7 - edu.isi.pegasus.planner.dax.Executable.ARCH
sparcv9 - edu.isi.pegasus.planner.dax.Executable.ARCH
SPARCV9 - edu.isi.pegasus.planner.dax.Executable.ARCH
Staged - Class in edu.isi.pegasus.planner.selector.transformation: This implementation of the Selector select a transformation of type STAGEABLE on all sites.
Staged() - Constructor for class edu.isi.pegasus.planner.selector.transformation.Staged
start - edu.isi.pegasus.planner.dax.Invoke.WHEN
stat - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
STAT - edu.isi.pegasus.planner.dax.Profile.NAMESPACE
Submit - Class in edu.isi.pegasus.planner.selector.transformation: This implementation of the Selector select a transformation of type STAGEABLE and only on the submit site.
Submit() - Constructor for class edu.isi.pegasus.planner.selector.transformation.Submit
success - edu.isi.pegasus.planner.dax.Invoke.WHEN
SUFFIX_TEMPORARY_FILE - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The suffix to be used while creating a temporary file to pass to the external siteselector.
sunos - edu.isi.pegasus.planner.dax.Executable.OS
SUNOS - edu.isi.pegasus.planner.dax.Executable.OS

T

toReplicaLocation() - Method in class edu.isi.pegasus.planner.dax.File: Adapter function to convert File object to Replica Location object so that we can serialize to YAML using existing interface.
toString() - Method in class edu.isi.pegasus.planner.dax.Edge
toString() - Method in class edu.isi.pegasus.planner.dax.Executable
toString() - Method in class edu.isi.pegasus.planner.dax.Invoke: Returns the object as String
toString() - Method in class edu.isi.pegasus.planner.dax.Transformation: Return the String version
toString() - Method in class edu.isi.pegasus.planner.selector.replica.Regex.Rank: Returns the textual representation of this
toString() - Method in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Writes out the contents of the class to a String in form suitable for displaying.
toTransformationCatalogEntries() - Method in class edu.isi.pegasus.planner.dax.Executable: Converts the executable into transformation catalog entries
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.ADAG: Generates a DAX representation.
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Write the XML representation of this object
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Edge
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Executable
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.File: Write the file object
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Invoke: Writes out XML representation using the writer
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.MetaData
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.PFN
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Profile
toXML(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Transformation: Writes out XML representation using the writer
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.CatalogType: Write the XML representation of this object
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.DAG
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.DAX
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Edge
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Executable
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.File: Write the file object, with indent level N
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Invoke: Writes out XML representation using the writer
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Job: Overrides Base TOXML method.
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.MetaData
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.PFN
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Profile
toXML(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Transformation: Writes out XML representation using the writer
toXML(XMLWriter, int, String) - Method in class edu.isi.pegasus.planner.dax.File: Write the file object as XML but render it as the elementname
toXMLParent(XMLWriter) - Method in class edu.isi.pegasus.planner.dax.Edge
toXMLParent(XMLWriter, int) - Method in class edu.isi.pegasus.planner.dax.Edge
toYAML() - Method in class edu.isi.pegasus.planner.dax.ADAG: Generates the YAML representation of a workflow.
TRANSFER() - Constructor for enum edu.isi.pegasus.planner.dax.File.TRANSFER
Transformation - Class in edu.isi.pegasus.planner.dax: This Object is used to create a complex Transformation.
Transformation(Transformation) - Constructor for class edu.isi.pegasus.planner.dax.Transformation: Copy Constructor
Transformation(String) - Constructor for class edu.isi.pegasus.planner.dax.Transformation: Create a new Transformation object
Transformation(String, String, String) - Constructor for class edu.isi.pegasus.planner.dax.Transformation: Create a new Transformation Object
TransformationSelector - Class in edu.isi.pegasus.planner.selector
TransformationSelector() - Constructor for class edu.isi.pegasus.planner.selector.TransformationSelector
TRUE - edu.isi.pegasus.planner.dax.File.TRANSFER

U

unsetInstalled() - Method in class edu.isi.pegasus.planner.dax.Executable: Unset the installed flag on the executable.
UPWARD_RANK - Static variable in class edu.isi.pegasus.planner.selector.site.heft.HeftBag: The constant to be passed to the accessor functions to get or set the upward rank for a node.
useForPlanning - Variable in class edu.isi.pegasus.planner.dax.File: A boolean tracking whether a file is for use of planner i.e.
useForPlanning() - Method in class edu.isi.pegasus.planner.dax.File: Returns boolean indicating whether the file is marked for planner use.
uses(CatalogType) - Method in class edu.isi.pegasus.planner.dax.Transformation: Set the file or executable being used by the transformation
uses(File, File.LINK) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, boolean, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, boolean, boolean, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, File.TRANSFER, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(File, File.LINK, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, boolean, boolean, boolean) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, boolean, boolean, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, boolean, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, File.TRANSFER, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(String, File.LINK, String) - Method in class edu.isi.pegasus.planner.dax.AbstractJob
uses(List<CatalogType>) - Method in class edu.isi.pegasus.planner.dax.Transformation: Set the List of files and/or executables being used by the transformation
uses(List<File>, File.LINK) - Method in class edu.isi.pegasus.planner.dax.AbstractJob

V

value - Variable in class edu.isi.pegasus.planner.selector.site.RoundRobin.NameValue: Stores the corresponding value to the name in the pair.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.ADAG.FORMAT: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.Executable.ARCH: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.Executable.OS: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.File.LINK: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.File.TRANSFER: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.Invoke.WHEN: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum edu.isi.pegasus.planner.dax.Profile.NAMESPACE: Returns the enum constant of this type with the specified name.
values() - Static method in enum edu.isi.pegasus.planner.dax.ADAG.FORMAT: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.Executable.ARCH: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.Executable.OS: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.File.LINK: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.File.TRANSFER: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.Invoke.WHEN: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum edu.isi.pegasus.planner.dax.Profile.NAMESPACE: Returns an array containing the constants of this enum type, in the order they are declared.
VERSION - Static variable in interface edu.isi.pegasus.planner.selector.ReplicaSelector: The version of this API.
VERSION - Static variable in class edu.isi.pegasus.planner.selector.site.NonJavaCallout: The version number associated with this API of non java callout site selection.
VERSION - Static variable in interface edu.isi.pegasus.planner.selector.SiteSelector: The version of the API of the Site Selector.

W

warnForFileURL(ReplicaCatalogEntry, String, boolean) - Method in class edu.isi.pegasus.planner.selector.replica.Default: * Warn for file URL not being selected because of mismatch in site attributes
WF_API_KEY - Static variable in class edu.isi.pegasus.planner.dax.ADAG: The type of Abstract Workflow API generated
WHEN() - Constructor for enum edu.isi.pegasus.planner.dax.Invoke.WHEN
windows - edu.isi.pegasus.planner.dax.Executable.OS
WINDOWS - edu.isi.pegasus.planner.dax.Executable.OS
writeTo(Writer, ADAG.FORMAT) - Method in class edu.isi.pegasus.planner.dax.ADAG: Generate a DAX File out of this object;
writeToFile(String) - Method in class edu.isi.pegasus.planner.dax.ADAG: Generate a DAX File out of this object in YAML format.
writeToFile(String, ADAG.FORMAT) - Method in class edu.isi.pegasus.planner.dax.ADAG: Generate a DAX File out of this object;
writeToSTDOUT() - Method in class edu.isi.pegasus.planner.dax.ADAG: Convenience function to write out the generated DAX to stdout in YAML format
writeToSTDOUT(ADAG.FORMAT) - Method in class edu.isi.pegasus.planner.dax.ADAG: Convenience function to write out the generated DAX to stdout
writeToWriter(Writer, boolean) - Method in class edu.isi.pegasus.planner.dax.ADAG: Deprecated.

X

x86 - edu.isi.pegasus.planner.dax.Executable.ARCH
X86 - edu.isi.pegasus.planner.dax.Executable.ARCH
x86_64 - edu.isi.pegasus.planner.dax.Executable.ARCH
X86_64 - edu.isi.pegasus.planner.dax.Executable.ARCH
xml - edu.isi.pegasus.planner.dax.ADAG.FORMAT

Y

yaml - edu.isi.pegasus.planner.dax.ADAG.FORMAT

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