Table of contents
Workflow environment detailsWorkflow execution details
Job statistics
Invocation statistics
DAX graph
DAG graph
Invocation breakdown chart(Across workflow)
Time chart(Across workflows)
Workflow execution gantt chart(Per workflow)
Host over time chart(Per workflow)
Workflow environment details
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| dag_file_name | :sipht-0.dag |
|---|---|
| wf_uuid | :af788fd3-9d28-41a8-83c7-6f5c1e614cc2 |
| submit_hostname | :newbio.cs.wisc.edu |
| dax_label | :sipht |
| planner_version | :3.1.0cvs |
| planner_arguments | :--nocleanup --conf /scratch/auto_sRNAPredict/pegasus/sipht_properties --force --dir /scratch/auto_sRNAPredict/workspaces/vahi/NC_007146.1312928393/submit/NC_007146.1312928393 --relative-dir / --cache /scratch/auto_sRNAPredict/workspaces/vahi/NC_007146.1312928393/submit/NC_007146_cache_file --sites wisc_bio --output local --cluster horizontal --dax /scratch/auto_sRNAPredict/workspaces/vahi/NC_007146.1312928393/submit/NC_007146_dax.xml |
| grid_dn | :- |
| user | :vahi |
| submit_dir | :/scratch/auto_sRNAPredict/workspaces/vahi/NC_007146.1312928393/submit/NC_007146.1312928393 |
| dax_version | :2.1 |
Workflow execution details
| # | Type | Succeeded | Failed | Incomplete | Total | Retries | Total Run (Retries Included) | Workflow Retries | |
|---|---|---|---|---|---|---|---|---|---|
| af788fd3-9d28-41a8-83c7-6f5c1e614cc2 (sipht) | 0 | ||||||||
| Tasks | 31 | 0 | 0 | 31 | 0 | 31 | |||
| Jobs | 33 | 0 | 0 | 33 | 0 | 33 | |||
| Sub Workflows | 0 | 0 | 0 | 0 | 0 | 0 | |||
Job statistics
# af788fd3-9d28-41a8-83c7-6f5c1e614cc2 (sipht)
| Job | Try | Site | Kickstart | Post | CondorQTime | Resource | Runtime | Seqexec | Seqexec-Delay |
|---|---|---|---|---|---|---|---|---|---|
| Blast_ID000023 | 1 | wisc_bio | 870.0 | - | 129.0 | - | 870.0 | - | - |
| Blast_QRNA_ID000025 | 1 | wisc_bio | 1205.0 | - | 86.0 | - | 1205.0 | - | - |
| Blast_candidate_ID000024 | 1 | wisc_bio | 0.0 | - | 40.0 | - | 0.0 | - | - |
| Blast_paralogues_ID000028 | 1 | wisc_bio | 16.0 | - | 45.0 | - | 16.0 | - | - |
| Blast_synteny_ID000027 | 1 | wisc_bio | 395.0 | - | 30.0 | - | 395.0 | - | - |
| FFN_parse_ID000026 | 1 | wisc_bio | 0.0 | - | 45.0 | - | 0.0 | - | - |
| Findterm_ID000001 | 1 | wisc_bio | 101.0 | - | 48.0 | - | 101.0 | - | - |
| Patser_ID000004 | 1 | wisc_bio | 0.0 | - | 60.0 | - | 0.0 | - | - |
| Patser_ID000005 | 1 | wisc_bio | 0.0 | - | 58.0 | - | 0.0 | - | - |
| Patser_ID000006 | 1 | wisc_bio | 0.0 | - | 53.0 | - | 0.0 | - | - |
| Patser_ID000007 | 1 | wisc_bio | 0.0 | - | 57.0 | - | 0.0 | - | - |
| Patser_ID000008 | 1 | wisc_bio | 0.0 | - | 62.0 | - | 0.0 | - | - |
| Patser_ID000009 | 1 | wisc_bio | 0.0 | - | 52.0 | - | 0.0 | - | - |
| Patser_ID000010 | 1 | wisc_bio | 0.0 | - | 45.0 | - | 0.0 | - | - |
| Patser_ID000011 | 1 | wisc_bio | 0.0 | - | 55.0 | - | 0.0 | - | - |
| Patser_ID000012 | 1 | wisc_bio | 0.0 | - | 63.0 | - | 0.0 | - | - |
| Patser_ID000013 | 1 | wisc_bio | 5.0 | - | 53.0 | - | 5.0 | - | - |
| Patser_ID000014 | 1 | wisc_bio | 0.0 | - | 55.0 | - | 0.0 | - | - |
| Patser_ID000015 | 1 | wisc_bio | 0.0 | - | 55.0 | - | 0.0 | - | - |
| Patser_ID000016 | 1 | wisc_bio | 0.0 | - | 58.0 | - | 0.0 | - | - |
| Patser_ID000017 | 1 | wisc_bio | 5.0 | - | 58.0 | - | 5.0 | - | - |
| Patser_ID000018 | 1 | wisc_bio | 0.0 | - | 62.0 | - | 0.0 | - | - |
| Patser_ID000019 | 1 | wisc_bio | 0.0 | - | 48.0 | - | 0.0 | - | - |
| Patser_ID000020 | 1 | wisc_bio | 0.0 | - | 52.0 | - | 0.0 | - | - |
| Patser_ID000021 | 1 | wisc_bio | 0.0 | - | 50.0 | - | 0.0 | - | - |
| Patser_ID000022 | 1 | wisc_bio | 0.0 | - | 50.0 | - | 0.0 | - | - |
| Patser_concate_ID000031 | 1 | wisc_bio | 0.0 | - | 50.0 | - | 0.0 | - | - |
| RNAMotif_ID000002 | 1 | wisc_bio | 10.0 | - | 48.0 | - | 10.0 | - | - |
| SRNA_ID000029 | 1 | wisc_bio | 75.0 | - | 45.0 | - | 75.0 | - | - |
| SRNA_annotate_ID000030 | 1 | wisc_bio | 5.0 | - | 155.0 | - | 5.0 | - | - |
| Transterm_ID000003 | 1 | wisc_bio | 10.0 | - | 55.0 | - | 10.0 | - | - |
| create_dir_sipht_0_wisc_bio | 1 | wisc_bio | 5.0 | - | 0.0 | - | 5.0 | - | - |
| stage_out_local_SRNA_annotate_ID000030_0 | 1 | local | 0.0 | - | 45.0 | - | 0.0 | - | - |
Invocation statistics
# af788fd3-9d28-41a8-83c7-6f5c1e614cc2 (sipht)
| Transformation | Count | Succeeded | Failed | Min | Max | Mean | Total |
|---|---|---|---|---|---|---|---|
| Blast:1.0.0 | 1 | 1 | 0 | 870.0 | 870.0 | 870.0 | 870.0 |
| Blast_QRNA:1.0.0 | 1 | 1 | 0 | 1205.0 | 1205.0 | 1205.0 | 1205.0 |
| Blast_candidate:1.0.0 | 1 | 1 | 0 | 0.0 | 0.0 | 0.0 | 0.0 |
| Blast_paralogues:1.0.0 | 1 | 1 | 0 | 16.0 | 16.0 | 16.0 | 16.0 |
| Blast_synteny:1.0.0 | 1 | 1 | 0 | 395.0 | 395.0 | 395.0 | 395.0 |
| FFN_parse:1.0.0 | 1 | 1 | 0 | 0.0 | 0.0 | 0.0 | 0.0 |
| Findterm:1.0.0 | 1 | 1 | 0 | 101.0 | 101.0 | 101.0 | 101.0 |
| Patser:3.0.1 | 19 | 19 | 0 | 0.0 | 5.0 | 0.526 | 10.0 |
| Patser_concate:1.0.0 | 1 | 1 | 0 | 0.0 | 0.0 | 0.0 | 0.0 |
| RNAMotif:3.0.4 | 1 | 1 | 0 | 10.0 | 10.0 | 10.0 | 10.0 |
| SRNA:1.0.0 | 1 | 1 | 0 | 75.0 | 75.0 | 75.0 | 75.0 |
| SRNA_annotate:1.0.0 | 1 | 1 | 0 | 5.0 | 5.0 | 5.0 | 5.0 |
| Transterm:2.0.5 | 1 | 1 | 0 | 10.0 | 10.0 | 10.0 | 10.0 |
| pegasus::dirmanager | 1 | 1 | 0 | 5.0 | 5.0 | 5.0 | 5.0 |
| pegasus::true | 1 | 1 | 0 | 0.0 | 0.0 | 0.0 | 0.0 |
DAX graph
DAG graph
Invocation breakdown chart
Time chart
Workflow execution gantt chart
show condor job [JOB_TERMINATED -SUBMIT]show kickstart time
show runtime as seen by dagman [JOB_TERMINATED - EXECUTE]
show resource delay [EXECUTE -GRID_SUBMIT/GLOBUS_SUBMIT]
show pre script time
show post script time
Note: Sub workflow job instances are drawn with orange border and clicking on the sub workflow job instance will
take you to the sub workflow chart page. Failed job instances are drawn with red border. Clicking on a non sub
workflow job instance will display the job instance information. Mouse over the bars will provided the job names.
Host over time chart
show condor job [JOB_TERMINATED -SUBMIT]show kickstart time
show runtime as seen by dagman [JOB_TERMINATED - EXECUTE]
show resource delay [EXECUTE -GRID_SUBMIT/GLOBUS_SUBMIT]
Note: Sub workflow job instances are drawn with orange border and clicking on the sub workflow job instance
will take you to the sub workflow chart page. Failed job instances are drawn with red border. Clicking on a non
sub workflow job instance will display the job instance information. Mouse over the bars will provided the job
names. Host names are marked 'Unknown' when the host name cannot be resolved by the pegasus system.